Remove old dispatching rules
This commit is contained in:
@@ -1,32 +0,0 @@
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const BATCH_SIZE = parseInt(process.env.BATCH_SIZE) || 100;
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const MU_CALL_SCOPE_ID_INITIAL_SYNC = process.env.MU_CALL_SCOPE_ID_INITIAL_SYNC || 'http://redpencil.data.gift/id/concept/muScope/deltas/consumer/initialSync';
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const BYPASS_MU_AUTH_FOR_EXPENSIVE_QUERIES = process.env.BYPASS_MU_AUTH_FOR_EXPENSIVE_QUERIES == 'true' ? true : false;
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const DIRECT_DATABASE_ENDPOINT = process.env.DIRECT_DATABASE_ENDPOINT || 'http://triplestore:8890/sparql';
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const MAX_DB_RETRY_ATTEMPTS = parseInt(process.env.MAX_DB_RETRY_ATTEMPTS || 5);
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const MAX_REASONING_RETRY_ATTEMPTS = parseInt(process.env.MAX_REASONING_RETRY_ATTEMPTS || 5);
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const SLEEP_BETWEEN_BATCHES = parseInt(process.env.SLEEP_BETWEEN_BATCHES || 1000);
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const SLEEP_TIME_AFTER_FAILED_REASONING_OPERATION = parseInt(process.env.SLEEP_TIME_AFTER_FAILED_REASONING_OPERATION || 10000);
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const SLEEP_TIME_AFTER_FAILED_DB_OPERATION = parseInt(process.env.SLEEP_TIME_AFTER_FAILED_DB_OPERATION || 60000);
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// Graphs
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const TARGET_GRAPH = process.env.TARGET_GRAPH || `http://mu.semte.ch/graphs/administrative-unit`;
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const LANDING_ZONE_GRAPH = process.env.DCR_LANDING_ZONE_GRAPH || `http://mu.semte.ch/graphs/landing-zone/leidinggevenden`;
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// ENDPOINTS
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const LANDING_ZONE_DATABASE = process.env.DCR_LANDING_ZONE_DATABASE || 'db';
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const LANDING_ZONE_DATABASE_ENDPOINT = process.env.DCR_LANDING_ZONE_DATABASE_ENDPOINT || `http://${LANDING_ZONE_DATABASE}:8890/sparql`;
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module.exports = {
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BATCH_SIZE,
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MU_CALL_SCOPE_ID_INITIAL_SYNC,
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BYPASS_MU_AUTH_FOR_EXPENSIVE_QUERIES,
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DIRECT_DATABASE_ENDPOINT,
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MAX_DB_RETRY_ATTEMPTS,
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MAX_REASONING_RETRY_ATTEMPTS,
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SLEEP_BETWEEN_BATCHES,
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SLEEP_TIME_AFTER_FAILED_DB_OPERATION,
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SLEEP_TIME_AFTER_FAILED_REASONING_OPERATION,
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LANDING_ZONE_GRAPH,
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TARGET_GRAPH,
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LANDING_ZONE_DATABASE_ENDPOINT
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};
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@@ -1,72 +0,0 @@
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const PREFIXES = `
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PREFIX org: <http://www.w3.org/ns/org#>
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PREFIX mandaat: <http://data.vlaanderen.be/ns/mandaat#>
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PREFIX lblodlg: <http://data.lblod.info/vocabularies/leidinggevenden/>
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PREFIX besluit: <http://data.vlaanderen.be/ns/besluit#>`
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const contextConfig = {
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addTypes: {
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scope: 'all', // 'inserts, 'deletes', 'all' or none. To add rdf:type to subjects of inserts, deletes or both
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exhausitive: false, // true or false: find all types for a subject, even if one is already present in delta
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},
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contextQueries: [
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// Case Leidnggevenden
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// They can be triggered when being inserted or when their link to a bestuursfunctie is added
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{
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trigger: { // subjectType or predicateValue
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subjectType: "lblodlg:Functionaris"
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},
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queryTemplate: (subject) => `
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${PREFIXES}
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CONSTRUCT {
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?functionaris org:holds ?bestuursfunctie ;
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?p ?o .
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?orgaanInTime lblodlg:heeftBestuursfunctie ?bestuursfunctie ;
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mandaat:isTijdspecialisatieVan ?orgaan .
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?orgaan besluit:bestuurt ?eenheid .
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?eenheid besluit:classificatie ?classification .
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} WHERE {
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GRAPH <http://mu.semte.ch/graphs/landing-zone/leidinggevenden> {
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VALUES ?functionaris { ${subject} }
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?functionaris org:holds ?bestuursfunctie ;
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?p ?o .
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?orgaanInTime lblodlg:heeftBestuursfunctie ?bestuursfunctie ;
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mandaat:isTijdspecialisatieVan ?orgaan .
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?orgaan besluit:bestuurt ?eenheid .
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?eenheid besluit:classificatie ?classification .
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}
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}`
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},
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{
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trigger: {
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predicateValue: "org:holds"
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},
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queryTemplate: (subject) => `
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${PREFIXES}
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CONSTRUCT {
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?functionaris org:holds ?bestuursfunctie ;
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?p ?o .
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?orgaanInTime lblodlg:heeftBestuursfunctie ?bestuursfunctie ;
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mandaat:isTijdspecialisatieVan ?orgaan .
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?orgaan besluit:bestuurt ?eenheid .
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?eenheid besluit:classificatie ?classification .
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} WHERE {
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GRAPH <http://mu.semte.ch/graphs/landing-zone/leidinggevenden> {
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VALUES ?functionaris { ${subject} }
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?functionaris org:holds ?bestuursfunctie ;
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?p ?o .
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?orgaanInTime lblodlg:heeftBestuursfunctie ?bestuursfunctie ;
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mandaat:isTijdspecialisatieVan ?orgaan .
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?orgaan besluit:bestuurt ?eenheid .
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?eenheid besluit:classificatie ?classification .
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}
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}`
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}
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]
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}
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module.exports = {
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contextConfig,
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PREFIXES
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};
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@@ -1,85 +0,0 @@
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const {
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transformStatements,
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deleteFromTargetGraph,
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insertIntoTargetGraph,
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} = require('./util');
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/**
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* Dispatch the fetched information to a target graph.
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* Note: <share://file/data> will be ADDED to it's own graph.
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* We take only care of adding them, not updating triples, this is a TODO
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* @param { mu, muAuthSudo } lib - The provided libraries from the host service.
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* @param { termObjectChangeSets: { deletes, inserts } } data - The fetched changes sets, which objects of serialized Terms
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* [ {
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* graph: "<http://foo>",
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* subject: "<http://bar>",
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* predicate: "<http://baz>",
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* object: "<http://boom>^^<http://datatype>"
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* }
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* ]
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* @return {void} Nothing
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*/
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async function dispatch(lib, data) {
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const { mu, fetch } = lib;
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let { termObjectChangeSets, termObjectChangeSetsWithContext } = data;
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// Both arrays are the same length, so we can zip them together for easier processing
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zippedChangeSets = termObjectChangeSets.map((o, i) => ({
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original: o,
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withContext: termObjectChangeSetsWithContext[i]
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}));
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console.log(`Received ${zippedChangeSets.length} change sets`)
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for (let { original, withContext } of zippedChangeSets) {
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let originalDeletes, originalInserts, insertsWithContext, deletesWithContext;
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try {
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originalInserts = original.inserts.map(o => `${o.subject} ${o.predicate} ${o.object}.`);
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originalDeletes = original.deletes.map(o => `${o.subject} ${o.predicate} ${o.object}.`);
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} catch (e) {
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console.log(`Error while processing change set: ${e}`);
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console.log(`Original change set: ${JSON.stringify(original)}`);
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throw e;
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}
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// Extra context needed for mapping from DL to OP model and filtering based on type.
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try {
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insertsWithContext = withContext.inserts.map(o => `${o.subject} ${o.predicate} ${o.object}.`);
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deletesWithContext = withContext.deletes.map(o => `${o.subject} ${o.predicate} ${o.object}.`);
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} catch (e) {
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console.log(`Error while processing change set with context: ${e}`);
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console.log(`Change set with context: ${JSON.stringify(withContext)}`);
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throw e;
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}
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if (originalDeletes.length) {
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// Map deletes from DL to OP model
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const transformedDeletes = await transformStatements(fetch, deletesWithContext);
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if (!transformedDeletes.length) {
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console.log(`Warn: Delete statements mapped to empty result.`);
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console.log(`Input: ${deletesWithContext}`);
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console.log(`Output: ${transformedDeletes}`);
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} else {
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await deleteFromTargetGraph(lib, transformedDeletes);
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}
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}
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if (originalInserts.length) {
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// Map inserts from DL to OP model
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const transformedInserts = await transformStatements(fetch, insertsWithContext);
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if (!transformedInserts.length) {
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console.log(`Warn: Insert statements mapped to empty result.`);
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console.log(`Input: ${insertsWithContext}`);
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console.log(`Output: ${transformedInserts}`);
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} else {
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await insertIntoTargetGraph(lib, transformedInserts);
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}
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}
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}
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}
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module.exports = {
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dispatch
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};
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@@ -1,85 +0,0 @@
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const { batchedDbUpdate, transformLandingZoneGraph } = require('./util');
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const {
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BYPASS_MU_AUTH_FOR_EXPENSIVE_QUERIES,
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DIRECT_DATABASE_ENDPOINT,
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MU_CALL_SCOPE_ID_INITIAL_SYNC,
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BATCH_SIZE,
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MAX_DB_RETRY_ATTEMPTS,
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SLEEP_BETWEEN_BATCHES,
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SLEEP_TIME_AFTER_FAILED_DB_OPERATION,
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TARGET_GRAPH,
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LANDING_ZONE_GRAPH,
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LANDING_ZONE_DATABASE_ENDPOINT
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} = require('./config');
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const endpoint = BYPASS_MU_AUTH_FOR_EXPENSIVE_QUERIES ? DIRECT_DATABASE_ENDPOINT : process.env.MU_SPARQL_ENDPOINT;
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/**
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* Dispatch the fetched information to a target graph.
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* @param { mu, muAuthSudo } lib - The provided libraries from the host service.
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* @param { termObjects } data - The fetched quad information, which objects of serialized Terms
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* [ {
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* graph: "<http://foo>",
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* subject: "<http://bar>",
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* predicate: "<http://baz>",
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* object: "<http://boom>^^<http://datatype>"
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* }
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* ]
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* @return {void} Nothing
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*/
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async function dispatch(lib, data) {
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const { mu, muAuthSudo } = lib;
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const { termObjects } = data;
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// Steps:
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// 1. Write the triples to the landing zone graph - withouth any mapping or filtering
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// 2. One-time reasoning run with the full landing zone graph and write the results to the target graph (on-finish)
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if (BYPASS_MU_AUTH_FOR_EXPENSIVE_QUERIES) {
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console.warn(`Service configured to skip MU_AUTH!`);
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}
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console.log(`Using ${endpoint} to insert triples`);
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if (termObjects.length) {
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const originalInsertTriples = termObjects.map(o => `${o.subject} ${o.predicate} ${o.object}.`);
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await batchedDbUpdate(
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muAuthSudo.updateSudo,
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LANDING_ZONE_GRAPH,
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originalInsertTriples,
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{ 'mu-call-scope-id': MU_CALL_SCOPE_ID_INITIAL_SYNC },
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LANDING_ZONE_DATABASE_ENDPOINT,
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BATCH_SIZE,
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MAX_DB_RETRY_ATTEMPTS,
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SLEEP_BETWEEN_BATCHES,
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SLEEP_TIME_AFTER_FAILED_DB_OPERATION
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);
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}
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}
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async function onFinishInitialIngest(lib) {
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const { muAuthSudo, fetch } = lib;
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console.log(`!! On-finish triggered !!`);
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const transformedInsertTriples = await transformLandingZoneGraph(fetch, endpoint);
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console.log(`Transformed ${transformedInsertTriples.length} triples`);
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await batchedDbUpdate(
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muAuthSudo.updateSudo,
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TARGET_GRAPH,
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transformedInsertTriples,
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{ 'mu-call-scope-id': MU_CALL_SCOPE_ID_INITIAL_SYNC },
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endpoint,
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BATCH_SIZE,
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MAX_DB_RETRY_ATTEMPTS,
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SLEEP_BETWEEN_BATCHES,
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SLEEP_TIME_AFTER_FAILED_DB_OPERATION
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);
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}
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module.exports = {
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dispatch,
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onFinishInitialIngest
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};
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@@ -1,168 +0,0 @@
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const {
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MAX_REASONING_RETRY_ATTEMPTS,
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SLEEP_TIME_AFTER_FAILED_REASONING_OPERATION,
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MAX_DB_RETRY_ATTEMPTS,
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SLEEP_BETWEEN_BATCHES,
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SLEEP_TIME_AFTER_FAILED_DB_OPERATION,
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TARGET_GRAPH,
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LANDING_ZONE_GRAPH,
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BATCH_SIZE,
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} = require('./config');
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async function batchedDbUpdate(
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muUpdate,
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graph,
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triples,
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extraHeaders,
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endpoint,
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batchSize,
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maxAttempts,
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sleepBetweenBatches = 1000,
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sleepTimeOnFail = 1000,
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operation = 'INSERT'
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) {
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for (let i = 0; i < triples.length; i += batchSize) {
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console.log(`Inserting triples in batch: ${i}-${i + batchSize}`);
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const batch = triples.slice(i, i + batchSize).join('\n');
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const insertCall = async () => {
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await muUpdate(`
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${operation} DATA {
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GRAPH <${graph}> {
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${batch}
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}
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}
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`, extraHeaders, endpoint);
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};
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await operationWithRetry(insertCall, 0, maxAttempts, sleepTimeOnFail);
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console.log(`Sleeping before next query execution: ${sleepBetweenBatches}`);
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await new Promise(r => setTimeout(r, sleepBetweenBatches));
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}
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}
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async function operationWithRetry(callback,
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attempt,
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maxAttempts,
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sleepTimeOnFail) {
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try {
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if (typeof callback === "function")
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return await callback();
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else // Catch error from promise - not how I would do it normally, but allows re use of existing code.
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return await callback;
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}
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catch (e) {
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console.log(`Operation failed for ${callback.toString()}, attempt: ${attempt} of ${maxAttempts}`);
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console.log(`Error: ${e}`);
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console.log(`Sleeping ${sleepTimeOnFail} ms`);
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if (attempt >= maxAttempts) {
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console.log(`Max attempts reached for ${callback.toString()}, giving up`);
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throw e;
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}
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await new Promise(r => setTimeout(r, sleepTimeOnFail));
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return operationWithRetry(callback, ++attempt, maxAttempts, sleepTimeOnFail);
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}
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}
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/**
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* Splits an array into two parts, a part that passes and a part that fails a predicate function.
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* Credits: https://github.com/benjay10
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* @public
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* @function partition
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* @param {Array} arr - Array to be partitioned
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* @param {Function} fn - Function that accepts single argument: an element of the array, and should return a truthy or falsy value.
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* @returns {Object} Object that contains keys passes and fails, each representing an array with elemets that pass or fail the predicate respectively
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*/
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function partition(arr, fn) {
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let passes = [], fails = [];
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arr.forEach((item) => (fn(item) ? passes : fails).push(item));
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return { passes, fails };
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}
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/**
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* Send triples to reasoning service for conversion
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*
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*/
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async function transformTriples(fetch, triples, mapping) {
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return await operationWithRetry(mainConversion(fetch, triples, mapping), 0,
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MAX_REASONING_RETRY_ATTEMPTS, SLEEP_TIME_AFTER_FAILED_REASONING_OPERATION);
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}
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async function mainConversion(fetch, triples, mapping) {
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let formdata = new URLSearchParams();
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formdata.append("data", triples);
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let requestOptions = {
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method: 'POST',
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body: formdata,
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redirect: 'follow'
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};
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const response = await fetch(`http://reasoner/reason/dl2op/${mapping}`, requestOptions)
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return await response.text();
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}
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async function transformStatements(fetch, triples, mapping = 'main') {
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console.log(`Received ${JSON.stringify(triples)} to transform`);
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const transformedTriples = await transformTriples(fetch, triples.join('\n'), mapping);
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statements = transformedTriples ? transformedTriples.replace(/\n{2,}/g, '').split('\n') : [];
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console.log(`CONVERSION: FROM ${triples.length} triples to ${statements.length}`);
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return statements;
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}
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async function deleteFromTargetGraph(lib, statements) {
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console.log(`Deleting ${statements.length} statements from target graph`);
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console.log(`Statements: ${JSON.stringify(statements)}`)
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await batchedDbUpdate(
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lib.muAuthSudo.updateSudo,
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TARGET_GRAPH,
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statements,
|
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{},
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process.env.MU_SPARQL_ENDPOINT,
|
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BATCH_SIZE,
|
||||
MAX_DB_RETRY_ATTEMPTS,
|
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SLEEP_BETWEEN_BATCHES,
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SLEEP_TIME_AFTER_FAILED_DB_OPERATION,
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'DELETE');
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}
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async function insertIntoTargetGraph(lib, statements) {
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console.log(`Inserting ${statements.length} statements into target graph`);
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console.log(`Statements: ${JSON.stringify(statements)}`)
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await batchedDbUpdate(
|
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lib.muAuthSudo.updateSudo,
|
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TARGET_GRAPH,
|
||||
statements,
|
||||
{},
|
||||
process.env.MU_SPARQL_ENDPOINT,
|
||||
BATCH_SIZE,
|
||||
MAX_DB_RETRY_ATTEMPTS,
|
||||
SLEEP_BETWEEN_BATCHES,
|
||||
SLEEP_TIME_AFTER_FAILED_DB_OPERATION,
|
||||
'INSERT');
|
||||
}
|
||||
|
||||
async function transformLandingZoneGraph(fetch, endpoint, mapping = 'main') {
|
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console.log(`Transforming landing zone graph: ${LANDING_ZONE_GRAPH}`);
|
||||
|
||||
const response = await fetch(`http://reasoner/reason/dl2op/${mapping}?data=${encodeURIComponent(`${endpoint}?default-graph-uri=&query=CONSTRUCT+%7B%0D%0A%3Fs+%3Fp+%3Fo%0D%0A%7D+WHERE+%7B%0D%0A+GRAPH+<${LANDING_ZONE_GRAPH}>+%7B%0D%0A%3Fs+%3Fp+%3Fo%0D%0A%7D%0D%0A%7D&should-sponge=&format=text%2Fplain&timeout=0&run=+Run+Query`)}`);
|
||||
const text = await response.text();
|
||||
const statements = text.replace(/\n{2,}/g, '').split('\n');
|
||||
|
||||
return statements;
|
||||
}
|
||||
|
||||
module.exports = {
|
||||
batchedDbUpdate,
|
||||
partition,
|
||||
transformStatements,
|
||||
transformLandingZoneGraph,
|
||||
deleteFromTargetGraph,
|
||||
insertIntoTargetGraph
|
||||
};
|
||||
Reference in New Issue
Block a user